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    • 1. 发明授权
    • High-throughput biomarker segmentation utilizing hierarchical normalized cuts
    • 高通量生物标志物分割利用分级归一化切割
    • US09111179B2
    • 2015-08-18
    • US13496627
    • 2010-09-17
    • Andrew JanowczykSharat ChandranAnant Madabhushi
    • Andrew JanowczykSharat ChandranAnant Madabhushi
    • G06K9/00G06K9/62G06T7/00
    • G06K9/6224G06K9/0014G06T7/12G06T7/162G06T2207/10056G06T2207/20016G06T2207/30024G06T2207/30072
    • A method and apparatus for obtaining segmented images of the stained regions may comprise quantifying the extent of the presence of staining of a biomarker in an original image of a sample, which may comprise selecting a domain swatch of data based upon a user specified domain knowledge; clustering the data within the original image by conducting a frequency weighted mean shift of the data within the original image to convergence, forming a hierarchical plurality of layers each having a different data resolution to form a hierarchical data pyramid; segmenting the plurality of mean shifted data images to determine in each mean shifted data image within the hierarchical data pyramid data not excluded as outside of the swatch; mapping the data not excluded as outside the swatch spatially back to the original image to create a final image; and, storing the final image on a storage medium for further analysis.
    • 用于获得染色区域的分割图像的方法和装置可以包括量化样品原始图像中生物标志物染色存在的程度,其可以包括基于用户指定的领域知识来选择数据域域样本; 通过对原始图像内的数据进行频率加权平均偏移来收敛,从而对原始图像内的数据进行聚类,形成分层数层,每层具有不同的数据分辨率,形成分层数据金字塔; 分割多个平均偏移数据图像,以确定不被排除在样本外的分层数据金字塔数据内的每个平均偏移数据图像; 将没有排除的数据映射到样板外部空间回到原始图像以创建最终图像; 并将最终图像存储在存储介质上用于进一步分析。
    • 3. 发明申请
    • High-Throughput Biomarker Segmentation Utilizing Hierarchical Normalized Cuts
    • 利用分层规范化切割的高通量生物标记分割
    • US20120219206A1
    • 2012-08-30
    • US13496627
    • 2010-09-17
    • Andrew JanowczykSharat ChandranAnant Madabhushi
    • Andrew JanowczykSharat ChandranAnant Madabhushi
    • G06K9/62
    • G06K9/6224G06K9/0014G06T7/12G06T7/162G06T2207/10056G06T2207/20016G06T2207/30024G06T2207/30072
    • A method and apparatus for obtaining segmented images of the stained regions may comprise quantifying the extent of the presence of staining of a biomarker in an original image of a sample, which may comprise selecting a domain swatch of data based upon a user specified domain knowledge; clustering the data within the original image by conducting a frequency weighted mean shift of the data within the original image to convergence, forming a hierarchical plurality of layers each having a different data resolution to form a hierarchical data pyramid; segmenting the plurality of mean shifted data images to determine in each mean shifted data image within the hierarchical data pyramid data not excluded as outside of the swatch; mapping the data not excluded as outside the swatch spatially back to the original image to create a final image; and, storing the final image on a storage medium for further analysis.
    • 用于获得染色区域的分割图像的方法和装置可以包括量化样品原始图像中生物标志物染色存在的程度,其可以包括基于用户指定的领域知识来选择数据域域样本; 通过对原始图像内的数据进行频率加权平均偏移来收敛,从而对原始图像内的数据进行聚类,形成分层数层,每层具有不同的数据分辨率,形成分层数据金字塔; 分割多个平均偏移数据图像,以确定不被排除在样本外的分层数据金字塔数据内的每个平均偏移数据图像; 将没有排除的数据映射到样板外部空间回到原始图像以创建最终图像; 并将最终图像存储在存储介质上用于进一步分析。